Kategórie
General

Summer of HPC: Neural networks in quantum chemistry

Summer of HPC: Neural networks in quantum chemistry. Join our team in Bratislava for the summer of 2021 and gain experience in programming neural networks and their usage in predicting molecular properties.

Summer of HPC: Neural networks in quantum chemistry

Join our team in Bratislava for the summer of 2021 and gain experience in programming neural networks and their usage in predicting molecular properties. PRACE partner countries and students studying at academic institutions in Europe have the opportunity to participate in summer internships at a HPC centre. Summer of HPC is a PRACE programme that offers summer placements at HPC centres across Europe to late-stage undergraduate and master’s students.

The main goal of this project is to investigate ability of NN frameworks to simulate molecular properties, where NN can emulate electronic wavefunction in local atomic orbitals representation as a function of molecular composition and atom positions or other molecular descriptors and representations. Our objective is to apply NN frameworks as predictor of molecular properties (energies, charges on atoms or evidence of hydrogen bonds) based on structural properties of these molecules (atomic positions). Implementation of NN frameworks will be performed using widely adopted TensorFlow library in Python code. For generation of molecular descriptors of chemical systems we apply DScribe library, which can be incorporated as a module directly in Python code. Next to the aforementioned “application part” of the project, we also plan to (in)validate the widely accepted fact, that GPGPUs are superior execution platform for NNs to CPUs.

Late-stage undergraduate and master’s students are invited to apply. Background in quantum-chemistry or physics is needed. We would alsowelcome advanced knowledge of fortran, basic knowledge of MPI, BLAS libraries and other HPC tools. Previous experience in HPC is not required as training will be provided. The most important attribute is a desire to learn, and share experiences with HPC.

Student will have access to the necessary learning material, as well as to our local IBM P775 supercomputer and x86 infiniband clusters.

The summer programme begins on July 1st and ends on August 30th 2021. At the end of the internship students present their projects and may win a prize for the best project!

Applications deadline is April 12th 2021.

Apply now

Training materials

More info about this project

Building International Cooperation in HPC: Visit to ITER Tenerife and Teide HPC 17 Jul - At the beginning of July 2025, Lucia Malíčková, representative of the National Supercomputing Centre (NSCC) and the National Competence Centre for High-Performance Computing (NCC for HPC), had the opportunity to visit the renowned technological and research institution ITER – Instituto Tecnológico y de Energías Renovables, S.A. on the island of Tenerife. As part of the working visit, she met with the center’s director Carlos Suarez and Jesús Rodríguez Alamo to discuss opportunities for establishing cooperation in the field of high-performance computing (HPC), research, development, and innovation using advanced technological infrastructures.
Meeting with Michal Valko, expert on large language models 15 Jul - The National Supercomputing Centre and the National Competence Centre for HPC, represented by Lucia Malíčková, met with prominent Slovak scientist Michal Valko, who is among the world’s leading experts in artificial intelligence and machine learning. They discussed opportunities for future collaboration, with a particular focus on leveraging Slovakia’s HPC capacities to support advanced research in large language models and algorithms that require minimal human feedback.
Data, Theology and HPC: A Collaboration Seeking Paths to Understanding 8 Jul - Continuing our collaboration with the Faculty of Theology at Trnava University! The National Supercomputing Centre (NSCC) and the National Competence Centre for HPC will continue their collaboration with the Faculty of Theology at Trnava University in 2025. Following a successful joint study that demonstrated the potential of artificial intelligence and high-performance computing in the analysis of religious texts, representatives of both institutions met again to identify new areas and opportunities for future joint projects.